Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926081.1_cds_XP_016474166.1_66219
CDS Infomation

[gene=LOC107795969] [db_xref=GeneID:107795969] [protein=uncharacterized protein LOC107795969 isoform X2] [protein_id=XP_016474166.1] [location=complement(join(83678..83732,84544..84767,84857..84917,85575..88110,88359..88473))] [gbkey=CDS]
Sequence

ATGTCTGAACCAGCAAAGGTTCGTTTGGTTCGTTGCCCAAAGTGTGAAAATTTACTTCCT
GAGCTCACTGATTATTCTGTTTACCAGTGTGGTGGTTGTGGTGCTGTTTTACGAGCCAAA
AATAAAAATGGGGAGTTAGAGGAATTTGCTGGGAAGTCTGAAGAAGAAACTGTGGGAGGA
ATTGTGGAGAATTTTGATCTTTCAGGGAAGAAACTTATGAATATAGGTGAGGGTTCGGGG
TATGATGTCAAGTCAAATACTAGTTCTTCCAGCACAAGGGAGAGGAGGAGGGTTTTGTGC
GATGCGCCTGAAACTTACGAGACCAGTTTTAGGAATGTTGCTGGTGATTGGGCTAATGAG
GATGAGAGGGTGATGTATAAGACTAACATTGATGAACAAGGTCAAGAAAATATGGTCAAT
GAGTTTGCTTTTGACTCCCGGAATGGAAAAGAAATTGAAACTCGAAGACCAGGCCGAGTT
CCAAATTGGAGAATTAGGGAGAGAAGTGAGGCTGAGGTTTTGCCCAGGGTTAGAAGAGTT
AATCTTCAAGGTATGAGGAATTCATCCTCCATTAACTCAGAAGAGGGTCCGTCGGGCTAC
TGTTCAGGCTCAAATTATGATACTGATAACAGGTTGTACAGGAACGATGTGGATGGGATC
GATCAGGATGAACAAATTCAAGAAAATATAGCTAAAGAATTTGATCTTTTTGACTCCCAG
CATGGAAAAGAAGTTGAAATCCGAAGAGCAGGCCGCGTTCCAGATTGGAGAAGTAAGGAG
AATTCTGAGGCAGAGGTGTTGCCCAGGGCTAGAAGAGTTGATCTTGAAGGTATGAGGTAT
GCGTCCTCCATTAACTCAGAAGAGGGTCCTTCTGGCTACTGGTCAGGTTCAAATTATGAT
AATGATAAGAGGTTGTATAGGAAGGATGTGGATGGGTTCAATCAGGTTGATCGTCCCGTT
GATGAGCGCGCAGAGCTTTTGAGAAAGTTTGATGAGCTAAAAGAACAGCTCAATCGGTTT
GGTGATGTGCCTGAGAAGCCTAACGAAAGAGTCCCACTTGAAAGGAGGATGGCTCATCAT
GGAAATCCCTATGATCTGTTTCCTCAAAGCTCTACAAGGATCATGAATAGAGCTTCGGCA
CAAAATCCTGTATCTGGTGAAAGACCTCCCTATCTGAACCACTACAATGCGCCCTCGCCT
TTTATGAATACAGCTGGTGGTGGATTTTATCCTCCTAGAGACCATATCCAGGGATATGGA
GGTCCTCCCAGGTCCCAGTTGTTTAGTGGAGATCCATACCAAACCCCGGATCCATTTCAA
TTGCAGCCATCTCATGGCCATTTTCCTGGGCGCTCAATGGACAATGAAATCCCACCTACG
GATCCTTTTCGACCTTACCAGCCTCAGACTAATCCTCATCATTCATCTTGCAGTTGTTTT
CATTGCTGCAATGTAAATCAAATCCGTAGTCGAGGTCCACCCACTGGTTTTGGTGATAAA
AGGTTCTCTGACATTCCCCAGAAACCAATGTTCTACCGTCATCAAAATAGTGGTGCATTT
GGTAAGCAAGATTATAATCCTCGAAATGCCAATTCTCTTCCATCAAAGCCGCAAAATTCT
CTATCACAAATGACTCATTCTGGTGATATGAACTCTGCAGCGGGTGGTTATGCTCGTCAA
CATCCTCCCAGGGTGCAGCCTAGTGGACAACAATGCCGCCCTGTGGCTGGCGGAGCCCCA
TTTTTGACGTGCTACAATTGTTTTGAGTTGCTGCAATTGCCTAAGGAAGTTTTTCGTGGA
GGTAAAAGGCGAAAAATGAAATGTGGGGCATGTTCTACAGTTATGGTTATTGCAGTTTTA
GACAATAGACTTGCTATTTCTATTGAAGAACGAGTGGATAAAAGCACTGACAAGATGGAT
CATCAGCATAGAGTCATGTTGAATGAAGGGAATCCATACTCCAATGCACATACAAACCGT
CCTAGCATGACCTTCTCTTCTGAAGATTACGATACTTCTAGATATGATTTCCATGCAATG
GATCAAGAACTCAGGTCACTGTCAACAGGCCGTGGAAGTTCCATTAAATCTGCCGAGATG
AGAAGCCTTGGTTCTACATCTTCCCGGAGTTCAAGGGAAGAGGACAACCTCATTAATGCT
GCTGCAACAATGGAAAAGTCTGACTCTGTGCTGCCAATGAAGGGTAAAGAATCTCCACCA
CCAGCTGGTTCACCACTGCAAGAATACTTTGAGTATTCTAACAAATTTCATGTAGCCAAC
CGCCTGGATCATGGAAACAGAAGTGTGCGCTCTGATGCAGAGAAGCTGATGCAGAAAAAG
ACTACTTTACAGCAAAACTCCGCTAAAGATACAGCTGTAGCAACTGAGATGGACATACCA
TCCAATGAGTATGGTAACACCGGTTCGTCTTTAGAGTCCGGTGGATCTAGTAAAGAAGGA
GACCAACTGAAAGCTACTAAAGAATCATTTTTCTCTGGCATCATAAAGAAGAGCTTTAAA
GAATTCAGCCGATCCGATCATTCCGCGGAGGAGGAAAAAGCCAATACTACAGTTAACGGG
CATCTTATACCAGATCGGTTGATTAAAAAGGCAGAAAAGCGTGCTGGACGGATACAACCT
GGACATTACTGGTATGACTTTCGAGCTGGATTCTGGGGAGTAACTGGTGGTCCTTGTCTG
GGCATTATCCCTCCATTCATTGAAGAATTCAATTATCCCATGCCTGAGAAATGTGCTGGT
GGAAATACTGGAGTATTTGTGAACGGGAGAGAGCTTCACCCAAAGGATCTGAAATTACTT
TCGAGTAGAGGTCTCCCAGCCGAGAGAGACAGATCTTATATTATTGAAATTTCTGGCAGA
GTCCTTGATGAGGACTCTGGTGAAGAGTTGGAGAGCCTGGGCAAACTTGCTCCGACTGTT
GAGAAAGCAAAGCATGGCTTCGGCATGAGACTTCCAAAGGTAGCAGCATAA

Peptide Sequence

PEP ID

XP_016474166.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107795969 isoform X2 [Nicotiana tabacum]
Sequence

MSEPAKVRLVRCPKCENLLPELTDYSVYQCGGCGAVLRAKNKNGELEEFAGKSEEETVGG
IVENFDLSGKKLMNIGEGSGYDVKSNTSSSSTRERRRVLCDAPETYETSFRNVAGDWANE
DERVMYKTNIDEQGQENMVNEFAFDSRNGKEIETRRPGRVPNWRIRERSEAEVLPRVRRV
NLQGMRNSSSINSEEGPSGYCSGSNYDTDNRLYRNDVDGIDQDEQIQENIAKEFDLFDSQ
HGKEVEIRRAGRVPDWRSKENSEAEVLPRARRVDLEGMRYASSINSEEGPSGYWSGSNYD
NDKRLYRKDVDGFNQVDRPVDERAELLRKFDELKEQLNRFGDVPEKPNERVPLERRMAHH
GNPYDLFPQSSTRIMNRASAQNPVSGERPPYLNHYNAPSPFMNTAGGGFYPPRDHIQGYG
GPPRSQLFSGDPYQTPDPFQLQPSHGHFPGRSMDNEIPPTDPFRPYQPQTNPHHSSCSCF
HCCNVNQIRSRGPPTGFGDKRFSDIPQKPMFYRHQNSGAFGKQDYNPRNANSLPSKPQNS
LSQMTHSGDMNSAAGGYARQHPPRVQPSGQQCRPVAGGAPFLTCYNCFELLQLPKEVFRG
GKRRKMKCGACSTVMVIAVLDNRLAISIEERVDKSTDKMDHQHRVMLNEGNPYSNAHTNR
PSMTFSSEDYDTSRYDFHAMDQELRSLSTGRGSSIKSAEMRSLGSTSSRSSREEDNLINA
AATMEKSDSVLPMKGKESPPPAGSPLQEYFEYSNKFHVANRLDHGNRSVRSDAEKLMQKK
TTLQQNSAKDTAVATEMDIPSNEYGNTGSSLESGGSSKEGDQLKATKESFFSGIIKKSFK
EFSRSDHSAEEEKANTTVNGHLIPDRLIKKAEKRAGRIQPGHYWYDFRAGFWGVTGGPCL
GIIPPFIEEFNYPMPEKCAGGNTGVFVNGRELHPKDLKLLSSRGLPAERDRSYIIEISGR
VLDEDSGEELESLGKLAPTVEKAKHGFGMRLPKVAA

Transcript Sequence

Gene sequence data has not been registered.